PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009796303.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 328aa    MW: 36417.4 Da    PI: 7.893
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009796303.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.29.7e-10172220553
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                     kr++r   NR +A rs +RK  ++ eLe+kv++L++e ++L  ++  l+
  XP_009796303.1 172 KRAKRILANRQSAARSKERKTRYTGELERKVQTLQTEATTLSAQITVLQ 220
                     9****************************************99987776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-15168232IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.714170233IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.6E-9170223No hitNo description
PfamPF001708.6E-9172221IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.27E-11172222No hitNo description
CDDcd147031.00E-21173222No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007231Biological Processosmosensory signaling pathway
GO:0008272Biological Processsulfate transport
GO:0009294Biological ProcessDNA mediated transformation
GO:0009652Biological Processthigmotropism
GO:0009970Biological Processcellular response to sulfate starvation
GO:0045596Biological Processnegative regulation of cell differentiation
GO:0051170Biological Processnuclear import
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
GO:0051019Molecular Functionmitogen-activated protein kinase binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MDPKFAGKPI QAQFLSGQTD LDQMQDTPTR GSRHRRAQSE TFFRFPNFDD DILLDDVVTD  60
FNLDVQAPSL MQQQQPANSA DSSSTGPALS AGPSDNNPKP LAHYRSLSVD ADFFDGLDFG  120
AAAAENKMMG GGPRHRHSNS MDGSFDFESE SLSVKKAMAP DKLAELSLID PKRAKRILAN  180
RQSAARSKER KTRYTGELER KVQTLQTEAT TLSAQITVLQ RDTSGIAAEN KELKFRLQAL  240
EQQAHLRDAL NETLREEVQR LKIEAGQIPA ANGNRGTRFH LPPQPQPFVQ CGNHHPQHQQ  300
QHIPRSTASN QTVPGQSQSS FFNFNNRA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00184DAPTransfer from AT1G43700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU5608950.0EU560895.1 Capsicum annuum clone NW040102 putative bZIP transcriptional activator mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009796303.10.0PREDICTED: transcription factor VIP1-like
SwissprotQ9MA754e-76VIP1_ARATH; Transcription factor VIP1
TrEMBLA0A0V0HXJ70.0A0A0V0HXJ7_SOLCH; Putative transcription factor VIP1-like
STRINGPGSC0003DMT4000453140.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25072351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.12e-64VIRE2-interacting protein 1